PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT32451
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 307aa    MW: 34117.9 Da    PI: 5.5595
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT32451genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.73.8e-52121461128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
               +ppGfrFhPt+eelv +yL+ kv++++++l ++i+evd+y++ePwdL+       +v++ +++ewyfFs +d+ky++g+r+nrat++g+Wkatg+dk+v+s
  EMT32451  12 VPPGFRFHPTEEELVGYYLAGKVAAQTIDL-DIIQEVDLYRIEPWDLQGeaerggEVDEqSSSEWYFFSFKDRKYPSGTRTNRATAAGFWKATGRDKPVMS 111
               69****************************.99**************9436666633332445*************************************9 PP

       NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
               + ++ ++g++ktLvfy+grap+g+ktdW++heyrl
  EMT32451 112 SrSRGVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 146
               856678***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-575167IPR003441NAC domain
PROSITE profilePS5100557.67612167IPR003441NAC domain
PfamPF023653.1E-2613146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MDQHHQQESS CVPPGFRFHP TEEELVGYYL AGKVAAQTID LDIIQEVDLY RIEPWDLQGE  60
AERGGEVDEQ SSSEWYFFSF KDRKYPSGTR TNRATAAGFW KATGRDKPVM SSRSRGVIGM  120
RKTLVFYRGR APNGRKTDWI IHEYRLQTSE HAPTQEEGWV VCRAFQKPAP NQKPSYIFPA  180
YATTPGLGSY YDARPWLHSQ VGGDLYYLQS ATGAAGPGGL GFPSQDVKYS SEDLLDSKQS  240
LFGNIPQLIE SPPPTALLGC GDDAVLQPQG PGHAVTGIDW NFLDSLLSTS QLHEYSATAA  300
SHLHLEQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-471216715168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002448830.11e-105hypothetical protein SORBIDRAFT_06g034010
SwissprotQ9C8W91e-86NAC30_ARATH; NAC domain-containing protein 30
TrEMBLM8D7K00.0M8D7K0_AEGTA; Uncharacterized protein
STRINGMLOC_67250.11e-170(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25943791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.16e-88vascular related NAC-domain protein 7